====== AFNI ======

**AFNI** is a software module available on **Comet**.

===== AFNI overview =====

To access **AFNI** on Comet, run ''module load AFNI''. This will load the //default// version of **AFNI**.

An overview of the module information is shown below (''module -r spider ^AFNI$''):

<code lang=text>
  AFNI:
    Description:
      AFNI is a set of C programs for processing, analyzing, and displaying functional MRI (FMRI) data - a technique for mapping human brain
      activity.

     Versions:
        AFNI/24.0.02-foss-2023a

  For detailed information about a specific "AFNI" package (including how to load the modules) use the module's full name.
  Note that names that have a trailing (E) are extensions provided by other modules.
  For example:

     $ module spider AFNI/24.0.02-foss-2023a
</code>

If there are multiple versions of **AFNI** listed, then you can load a //specific// version as follows:
<code lang=bash>
$ module load AFNI/version_string
</code>

You can find the most //up to date information// whilst logged on to Comet by running ''module -r spider ^AFNI$''.

----

===== AFNI Help =====

The module **AFNI** has the following embedded help text (''module help AFNI''):

<code lang=text>Description
===========
AFNI is a set of C programs for processing, analyzing, and displaying functional MRI (FMRI) data -
 a technique for mapping human brain activity.

More information
================
 - Homepage: http://afni.nimh.nih.gov/

</code>

----

===== AFNI Dependencies =====

The //default// version of the module **AFNI** has the following dependencies:

   * foss/2023a
   * tcsh/6.24.10-GCCcore-12.3.0
   * Python/3.11.3-GCCcore-12.3.0
   * X11/20230603-GCCcore-12.3.0
   * motif/2.3.8-GCCcore-12.3.0
   * R/4.3.2-gfbf-2023a
   * PyQt5/5.15.10-GCCcore-12.3.0
   * expat/2.5.0-GCCcore-12.3.0
   * libpng/1.6.39-GCCcore-12.3.0
   * libjpeg-turbo/2.1.5.1-GCCcore-12.3.0
   * GSL/2.7-GCC-12.3.0
   * GLib/2.77.1-GCCcore-12.3.0
   * zlib/1.2.13-GCCcore-12.3.0
   * freeglut/3.4.0-GCCcore-12.3.0
   * Pillow/10.0.0-GCCcore-12.3.0
   * matplotlib/3.7.2-gfbf-2023a
   * SciPy-bundle/2023.07-gfbf-2023a
   * Xvfb/21.1.8-GCCcore-12.3.0
   * FFmpeg/6.0-GCCcore-12.3.0

----

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