====== Dorado ======

**Dorado** is a software module available on **Comet**.

===== Dorado overview =====

To access **Dorado** on Comet, run ''module load Dorado''. This will load the //default// version of **Dorado**.

An overview of the module information is shown below (''module -r spider ^Dorado$''):

<code lang=text>
  Dorado: Dorado/1.1.1
    Description:
      ONT Dorado basecalling toolkit.

    This module can be loaded directly: module load Dorado/1.1.1

    Help:
      Dorado 1.1.1 (Oxford Nanopore) — basecalling toolkit
      This module prepends the Dorado bin directory to PATH.
      
      Binary path:
        /opt/software/manual/apps/Dorado/1.1.1/dorado-1.1.1-linux-x64/bin
</code>

If there are multiple versions of **Dorado** listed, then you can load a //specific// version as follows:
<code lang=bash>
$ module load Dorado/version_string
</code>

You can find the most //up to date information// whilst logged on to Comet by running ''module -r spider ^Dorado$''.

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===== Dorado Help =====

The module **Dorado** has the following embedded help text (''module help Dorado''):

<code lang=text>Dorado 1.1.1 (Oxford Nanopore) — basecalling toolkit
This module prepends the Dorado bin directory to PATH.

Binary path:
  /opt/software/manual/apps/Dorado/1.1.1/dorado-1.1.1-linux-x64/bin

</code>

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===== Dorado Dependencies =====

There are no dependencies listed for **Dorado**

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