====== Subread ======

**Subread** is a software module available on **Comet**.

===== Subread overview =====

To access **Subread** on Comet, run ''module load Subread''. This will load the //default// version of **Subread**.

An overview of the module information is shown below (''module -r spider ^Subread$''):

<code lang=text>
  Subread: Subread/2.0.6-GCC-12.3.0
    Description:
      High performance read alignment, quantification and mutation discovery

    This module can be loaded directly: module load Subread/2.0.6-GCC-12.3.0

    Help:
      
      Description
      ===========
      High performance read alignment, quantification and mutation discovery
      
      More information
      ================
       - Homepage: https://subread.sourceforge.net/
</code>

If there are multiple versions of **Subread** listed, then you can load a //specific// version as follows:
<code lang=bash>
$ module load Subread/version_string
</code>

You can find the most //up to date information// whilst logged on to Comet by running ''module -r spider ^Subread$''.

----

===== Subread Help =====

The module **Subread** has the following embedded help text (''module help Subread''):

<code lang=text>Description
===========
High performance read alignment, quantification and mutation discovery

More information
================
 - Homepage: https://subread.sourceforge.net/

</code>

----

===== Subread Dependencies =====

The //default// version of the module **Subread** has the following dependencies:

   * GCC/12.3.0

----

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