BCL Convert is provided by Illumina BCL Convert replaces bclfastq

module spider BCL-Convert/

• the software can only be used “for the purpose of processing and analyzing data generated from an Illumina genetic sequencing instrument owned and operated solely by the University”
• The software is only to be used for research purposes
• The software can only be used with data generated from the Illumina instrument, and not any data generated from other sources

    Installed in: ''/opt/software/manual/apps/BCL-Convert/''
    
    Usage:
      Run `''bcl-convert''` to access the BCL Convert command-line tool.
    
    Examples:
      ''bcl-convert --help''
     ''bcl-convert --input-dir <RunFolder> --output-dir <OutDir> --sample-sheet <SampleSheet.csv>''

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