Table of Contents

bgen

bgen is a software module available on Comet.

bgen overview

To access bgen on Comet, run module load bgen. This will load the default version of bgen.

An overview of the module information is shown below (module -r spider ^bgen$):

bgen: bgen/4.1.3-GCCcore-10.2.0
    Description:
      A BGEN file format reader. It fully supports the BGEN format specifications 1.2 and 1.3.

    This module can be loaded directly: module load bgen/4.1.3-GCCcore-10.2.0

    Help:
      
      Description
      ===========
      A BGEN file format reader. It fully supports the BGEN format specifications 1.2 and 1.3.
      
      More information
      ================
       - Homepage: https://github.com/limix/bgen

If there are multiple versions of bgen listed, then you can load a specific version as follows:

$ module load bgen/version_string

You can find the most up to date information whilst logged on to Comet by running module -r spider ^bgen$.


bgen Help

The module bgen has the following embedded help text (module help bgen):

Description
===========
A BGEN file format reader. It fully supports the BGEN format specifications 1.2 and 1.3.

More information
================
 - Homepage: https://github.com/limix/bgen


bgen Dependencies

The default version of the module bgen has the following dependencies:


Back to software