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Dorado

Dorado is a software module available on Comet.

Dorado overview

To access Dorado on Comet, run module load Dorado. This will load the default version of Dorado.

An overview of the module information is shown below (module -r spider ^Dorado$): 

Dorado: Dorado/1.1.1
    Description:
      ONT Dorado basecalling toolkit.

    This module can be loaded directly: module load Dorado/1.1.1

    Help:
      Dorado 1.1.1 (Oxford Nanopore) — basecalling toolkit
      This module prepends the Dorado bin directory to PATH.
      
      Binary path:
        /opt/software/manual/apps/Dorado/1.1.1/dorado-1.1.1-linux-x64/bin

If there are multiple versions of Dorado listed, then you can load a specific version as follows: 

$ module load Dorado/version_string

You can find the most up to date information whilst logged on to Comet by running module -r spider ^Dorado$.

Dorado Help

The module Dorado has the following embedded help text (module help Dorado): 

Dorado 1.1.1 (Oxford Nanopore) — basecalling toolkit
This module prepends the Dorado bin directory to PATH.

Binary path:
  /opt/software/manual/apps/Dorado/1.1.1/dorado-1.1.1-linux-x64/bin

Dorado Dependencies

There are no dependencies listed for Dorado

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