Table of Contents

Subread

Subread is a software module available on Comet.

Subread overview

To access Subread on Comet, run module load Subread. This will load the default version of Subread.

An overview of the module information is shown below (module -r spider ^Subread$): 

Subread: Subread/2.0.6-GCC-12.3.0
    Description:
      High performance read alignment, quantification and mutation discovery

    This module can be loaded directly: module load Subread/2.0.6-GCC-12.3.0

    Help:
      
      Description
      ===========
      High performance read alignment, quantification and mutation discovery
      
      More information
      ================
       - Homepage: https://subread.sourceforge.net/

If there are multiple versions of Subread listed, then you can load a specific version as follows: 

$ module load Subread/version_string

You can find the most up to date information whilst logged on to Comet by running module -r spider ^Subread$.

Subread Help

The module Subread has the following embedded help text (module help Subread): 

Description
===========
High performance read alignment, quantification and mutation discovery

More information
================
 - Homepage: https://subread.sourceforge.net/

Subread Dependencies

The default version of the module Subread has the following dependencies:

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