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HPC Support
Trace: • diamond

DIAMOND

DIAMOND is a software module available on Comet.

DIAMOND overview

To access DIAMOND on Comet, run module load DIAMOND. This will load the default version of DIAMOND.

An overview of the module information is shown below (module -r spider ^DIAMOND$):

DIAMOND: DIAMOND/2.1.9-GCC-13.2.0
    Description:
      Accelerated BLAST compatible local sequence aligner

    This module can be loaded directly: module load DIAMOND/2.1.9-GCC-13.2.0

    Help:
      
      Description
      ===========
      Accelerated BLAST compatible local sequence aligner
      
      More information
      ================
       - Homepage: https://github.com/bbuchfink/diamond

If there are multiple versions of DIAMOND listed, then you can load a specific version as follows:

$ module load DIAMOND/version_string

You can find the most up to date information whilst logged on to Comet by running module -r spider ^DIAMOND$.


DIAMOND Help

The module DIAMOND has the following embedded help text (module help DIAMOND):

Description
===========
Accelerated BLAST compatible local sequence aligner

More information
================
 - Homepage: https://github.com/bbuchfink/diamond


DIAMOND Dependencies

The default version of the module DIAMOND has the following dependencies:

  • GCC/13.2.0
  • zlib/1.2.13-GCCcore-13.2.0

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Table of Contents

  • DIAMOND
    • DIAMOND overview
    • DIAMOND Help
    • DIAMOND Dependencies

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