Our Research Projects


Our Research Projects

The research of our HPC user community at Newcastle University spans many disciplines and subject areas. A list of current projects which have used the HPC facilities are shown below.

The wordcloud graphic above is a dynamic representation of the keywords used in the descriptions of our published HPC research projects.

We also maintain a software index of the common tools and technologies which our HPC projects are using.

Title
Project ID 2554
Project ID 2556
Project ID 2557
Project ID 2559
Project ID 2560
Project ID 2561
Project ID 2562
Project ID 2563
Project ID 2564
Project ID 2565
Project ID 2566
Project ID 2567
Project ID 2568
Project ID 2569
Project ID 2570
Project ID 2571
Project ID 2574
Project ID 2575
Project ID 2576
Project ID 2577
Project ID 2578
Project ID 2579
Project ID 2581
Project ID 2582
Project ID 2583
Project ID 2584
Project ID 2585
Project ID 2586
Project ID 2587
Project ID 2589
Project ID 2591
Project ID 2593
Project ID 2594
Project ID 2595
Project ID 2597
Project ID 2599
Project ID 2600
Project ID 2601
Project ID 2602
Project ID 2603
Project ID 2604
Project ID 2605
Project ID 2606
Project ID 2607
Project ID 2608
Project ID 2609
Project ID 2610
Project ID 2611
Project ID 2612
Project ID 2613
Project ID 2614
Project ID 2616
Project ID 2617
Project ID 2618
Project ID 2619
Project ID 2620
Project ID 2621
Project ID 2623
Project ID 2624
Project ID 2625
Project ID 2626
Project ID 2627
Project ID 2628
Project ID 2629
Project ID 2630
Project ID 2631
Project ID 2632
Project ID 2633
Project ID 2634
Project ID 2636
Project ID 2637
Project ID 2638
Project ID 2639
Project ID 2640
Project ID 2641
Project ID 2642
Project ID 2643
Project ID 2644
Project ID 2645
Project ID 2646
Project ID 2647
Project ID 2648
Project ID 2649
Project ID 2650
Project ID 2651
Project ID 2652
Project ID 2653
Project ID 2654
Project ID 2655
Project ID 2656
Project ID 2657
Project ID 2660
Project ID 2661
Project ID 2662
Project ID 2663
Project ID 2664
Project ID 2665
Project ID 2667
Project ID 2668
Project ID 2669
Project ID 2671
Project ID 2672
Project ID 2673
Project ID 2674
Project ID 2675
Project ID 2676
Project ID 2677
Project ID 2678
Project ID 2679
Project ID 2681
Project ID 2682
Project ID 2683
Project ID 2684
Project ID 2685
Project ID 2686
Quantum computing feasibility
Improving the Quality of Synthetic Data for Clinical Trials
Internal solitary waves of mode-2: theory, models and experiments
Multimorbidity and the risk of subsequent dementia
Newcastle University and Northumbrian Water KTP
3-D NUMERICAL SIMULATIONS OF SUBSEA JUMPER TRANSPORTING INTERMITTENT SLUG FLOWS
3d nucleus segmentation
A CFD Approach to Emissions Control
A Statistical Framework for efficient Evidence Generation in diagnostics (SaFEGen)
A combined experimental and computational investigation of greenhouse gas adsorption on biochar
A combined experimental and computational investigation of greenhouse gas adsorption on biochar
A systematic comparison of integrated genomic platforms and bioinformatics pipelines for next generation sequencing in patients with rare neuromuscular disease
ADMISSION Statistical Genetics
AGM
AI BADBIR
AI Driven Discovery for Designer Biocatalytic Enzymes for Specifically Cold-Active Alkaline α-Amylases in Sustainable Detergent Applications.
ALL_Mito
AMR Flows
AMR Modelling
Abstraction of Stochastic Systems
Acoustofluidic LbL machine
Actionable deep learning under uncertainty for carbon-centric building operations
Active vision and pattern discrimination in bumblebees
Adaptive Treatment Planning for ICU Patients using Multimodal Data Fusion with Uncertainty Quantification
Advancing Molecular Modeling with Machine-Learned Interatomic Potentials (MLIPs)
Advancing Water Disaggregation through Privacy Preserving Conditional Generative Models and Explainable AI
Agent-based models of food-hoarding birds
Alloimmune interactions in human bone marrow transplant tissue
Alzheimer's Disease Progression Modeling via T1 MRI
Amide Hole Transporters for optoelectronic applications
An investigation on the changing size-frequency distributions and life history traits of Acropora digitifera at a shallow reef in Palau using reef orthomosaics
Analysing single cell RNA sequencing data
Analysis of Digital Mobility Outcomes from the EJS-ACT PD and mobilise-D Studies
Analysis of Global Marine Biodiversity Patterns
Analysis of High Frequency Investor Trading Data
Analysis of scRNASeq data for p53 and NF-kB gene signatures
Analysis of snRNAseq data of muscle samples from patients with muscular diseases
Anelastic simulations of dynamo action in the solar tachocline
Antarctic Global Positioning System (GPS) Data Processing
Antimicrobial Resistance
Application Cloud Resource Usage Prediction
Applications of Deep Learning and Large Language Models in Multi-Modal Ophthalmic Imaging for Brain Health
Applied Biomimetics Marine Hydrodynamics
Applying Machine Learning to Extract Insights from IVCM Imaging in LSCT Patients
Artificial Intelligence for knowledge extraction and decision making support in Rheumathology
Artificial Intelligence for the analysis of Retinal imaging data
Assessing and predicting natural and environmental impacts on cultural heritage landscapes: a case study on Hadrian's Wall
Assessing the Impact of Scour on the Capacity of Foundations for Floating Offshore Wind Turbines
Augmenting galaxy catalogues in cosmological simulations using machine learning
AutoPart: Automated Detection and Analysis of Character Partition Structure in Morphological Phylogenetics
Autonomous Racing
BIOlogical Factors that Limit sustAined Remission in rhEumatoid arthritis (the BIO-FLARE study)
BREAKTHROUGH MEASURES FOR US AND EUROPEAN PATENTS
BSU Pilot
BSU beta scRNA-seq
Battery Materials Analysis
Bayesian Time Series Modelling
BeeGuards
Big Data for Synthetic Biology
BioDynaMo retinal development
Biodiversity response to habitat fragmentation
Bioinformatic and bioimaging analysis of stress responses in Gram-negative bacteria
Bioinformatics Support Unit
Bioinformatics in genetic skin conditions
Bioinformatics_Stach
Biostatistics Research Group
Bone marrow niches in development and disease
Brain Health Assessment via Multi-Modal Retinal Imaging with Deep Learning and Large Language Models
Brain aging neuroimaging analysis
CFD analysis for advanced ship propulsion systems with hydrogen
CFD for reacting and high-speed flows
CIEL
CME8128 MEng Research Project
CRUK_omics
CTN NHP
CTN Neural Circuits
CableDyn
Calculating long time quantum trajectories using arbitrary precision floating point numbers on COMET
Calculation of structures and molecular physics of gas phase complexes
Cell Senscence Assay Counting
Cell interactions in fourth pharyngeal arch artery morphogenesis
CellModeller cloud
Changes in cognitive and motor function in ageing and neurodegenerative conditions
Characterisation of endothelial dsRNA-ome in the context of A-to-I RNA editing
Characterising Human Milk Oligosaccharides in Breast Milk and their Degradation by Bifidobacterium species
Chemical Looping Ammonia Synthesis Material Screening
Chemistry-Orca
Choice Modelling in transportation using the XGBoost
City Pulse GNN
Climate Resilient Heat Electrification for Net-Zero Emission Whole Energy Systems – RENEW
Climate change effects on the spread of wildfires
Clonal Haematopoeisis in elderly, sarcoidosis and ECD
Cluster Sputtering Simulation
Coastal protection under horizontal disk structures
Comet Acceptance Testing Group 1
Comet Acceptance Testing Group 2
Comet Acceptance Testing Group 3
Comet HPC Training Workshops
Compact Logic Gate Networks
Computational Analysis of Transcriptomic Sequencing Data in Fibrosis Research
Computational Chemistry of Main Group Compounds
Computational Structural Biology
Computational cardiology research and teaching activity
Computational fluid dynamics (CFD) study of Severe Slugging in a S-Shape Steel Lazy Wave Riser (SLWR)
Computational modelling of neural layer formation
Computational simulation for fundamental understanding of turbulent reacting flows and its modelling
Computer-aided drug design
Computing Officers - FMS
Computing Officers - HASS
Computing Officers - SAgE
Consultancy Demo Access
Contact analysis of roller-cam interface
Containerised analysis of dietary metabarcoding data for ecological network construction
Continual learning in neuromodulated spiking neural networks
Convection and dynamo action in the solar interior
Cooling Power Electronics
Coral Adapt
Correlating Neural Activity RSE
Cortical folding analysis and simulation
Cosmic rays in AGN outflows
Creativity Engine
Cross tissue expression
Cross-trait meta-analysis of primary biliary cholangitis (PBC) and other immune-mediated inflammatory diseases (IMIDs)
Crystal Structure Prediction
Crystallographically-Architected Mechanical Metamaterials (CrystArMM)
Cyprid cement gland differential transcriptome
DARWIN
DFT studies of superbase catalysts for methyl methacrylate production in Collaboration with Mitsubishi Chemical UK
DNAcomputing
DWI analysis
Dark sector from cosmic shear
Daryl Shanley's Lab
Data-Driven Synthesis of CPS
Data_Driven_Abstraction
Decarbonisation of thermal separation processes for removing water and organic solvents from high-performance ingredients
Deciphering the local effects of ToIDC administration on the inflamed synovial microenvironment of patients in the AutoDeCra 1 clinical trial
Deep Learning Surrogate Modelling for Hydrodynamic Flood Simulation in Data-Scarce Urban Watersheds
Deep Learning for Drug Repurpsing
Deep learning model development and training
DeepLabCut Deep Learning Model for Dog pose Estimation
Delineating the cutaneous tumour microenvironment in Birt-hogg-Dubé Syndrome
Design Unit - Mechanical Stress Analysis Project A.
Design and FEA simulation of a custom CPAP mask device
Design and Manufacture of Novel 3D printed electrodes
Development and Analysis of High-Resolution Rainfall Datasets for the UK and Ireland
Development and application of statistical methodology for the detection and characterisation of genetic factors in complex disease
Development of Intact Stability Criteria for Indonesian Traditional Small Fishing Vessels
Development of an Energy Efficiency Decision Support System for Ship with Integrated Energy Saving Technologies
Development of microsatellite instability assays
Development of novel non-invasive mapping of lipid composition in breast cancer using novel chemical shift magnetic resonance imaging to unravel the underpinning biological mechanism
DiMEN Spatial Transcriptomics
Diamond
Dicentric chromosomes in Cancer
Distributed Glacier surface energy mass balance of Himalayan Glaciers
Diversity in Chronobiology: Discovering dynamics and interactions in chronobiology using multimodal, multiscale, and multinational data
Does reactivation of developmental programmes support skin infiltration in leukaemia?
Dormouse Modelling NE
Doxorubicin-Induced Cardiomyocyte Senescence and Fibroblast Remodelling
Dynamic Charging for Electric Vehicles
Dynamic models of innovation
Dynamics of planetary cores
Dynamos in planets
ELU2024
EPSRC e-mudrive wave generater
EXTREME-FUTURES
Earth Observation and Machine Learning to Map Past Water in the Middle East and North Africa
Efficient Robustness Analysis of Deep Neural Networks
Elucidating splicing factor function and retinal splicing programmes: developing new therapeutic strategies for splicing factor retinitis pigmentosa
Energy Forecasting and Optimisation in Smart Buildings Using Explainable and Transferable Deep Learning
Energy Materials Laboratory
Epigenetics of MSK
Epilepsy detection based on unsupervised learning
Establishing a UK Clinical Trial Ready ADTKD MUC1 Cohort
Evaluating Neural Encoder-Decoder Models for Period-Avoiding DNA Storage Sequences
Evaluating the impact of Land Cover and Climate Change on Water Resources
Exam Paper OCR for Analysis (PhD Research)
Excited State Dynamics
Excited State Structure of BODIPY Dyes
Experimental data constrained computation of Elementary Flux Mode
Exploratory computational investigations of single cell/nuclei of ichthyosis and CPRD datasets
Exploratory computational investigations of single cell/nuclei of ichthyosis samples
Exploring the role of repetitive genomic regions in childhood cancer and leukaemia, using long-read and hybrid sequencing technologies
FLF Next generation atomistic modelling for medicinal chemistry and biology
FSHD omics data
Fluid dynamics inside planetary interiors
Fluid flow in an RPB using LBM
Food Recognition Model for Self-Recall Dietary Assessment
Formal Verification and Synthesis of Stochastic Systems
Freshwater AOH and STAR
GCRF: DAMS 2.0: Design and Assessment of resilient and sustainable interventions in water-energy-food-environment Mega Systems
GLOF process chain modelling in the Bhutan Himalaya
GNSS and InSAR geodesy
Generative AI evaluation
Generative AI for Emotion-Aware Speech and Dialogue
Generative AI for dynamic health monitoring system
Generic Atmospheric Correction Online Service for InSAR (GACOS)
Genetic studies of liver disease
Genetic studies using UK Biobank
Genetic variation in eye disease
Genetics of Beta Cell function
Genome Analysis of Streptomyces
Genomic Characterisation of B cell non-Hodgkin Lymphoma
Geostrophic adjustment within a rotating, stratified fluid
Geothermal Exploration Modelling
GipsyX GNSS Research Compute
Glab_seq
Gut Microbiome and Metabolic Disorders
HOnK: Hub Ontology for Knowledge
HPC usage
HTC modelling and optimisation
HTC reactor
Health AI
HeiMOVE
Hereditary Leiomyomatosis and Renal Cell Cancer (HLRCC)
Herpetology genomics
Hifidelity Simulation of VAWT
High Entropy Alloys Design
High Power Computing for training Deep Reinforcement Learning Models for Optimisation Problems
High throughput transcriptomics of Cyanobacteria
High-fidelity simulation and modelling of turbulent flows
High-throughput analysis of microscopy images from drug screens
Horned-OWL bench
IBD-RESPONSE
ICED (Intensified Cooling for Electronic Devices)
IHEC
IMAGINE
Identification and exploitation of biosynthetic pathways from Ascocoryne sarcoides
Identification of sarcopenia from clusters of multiple long-term conditions in UK Biobank
Identifying candidate non-coding loci for molecular diagnoses in human unsolved colomboma patients
Image Generation with Deep Generative Models for Medical Imaging
Imaging Geodesy - InSAR
Imago
Impact of the use of weather information on the accuracy of power production models for offshore wind turbines
Improving radar rainfall estimates for using Monte Carlo ensemble simulation
Insect Transport Protein Evolution
Integrating Machine Learning into Bioinformatics Research Workflows
Integration of novel marine propulsion: design and optimisation
Intelligent Internet of Things
Interactions between internal waves and offshore wind infrastructure
Internal Gravity Waves in Massive Stars
Investigating Mitochondrial Translation Defects
Investigating polysaccharide breakdown capacity of the human gut microbiota
Investigating the bidirectional links between periodontal disease and inflammatory bowel diseases
Investigating the role of bacterial polysaccharides in the maintenance of healthy gut bacteria
Ion transport and interfaces in solid electrolytes
Kalanchoe blossfeldiana
KnockoffGWAS Framework
Large-Scale Energy-System Optimization Benchmarking
Learning growth mechanisms of tail realistic preferential attachment models from network degree distributions
Leukaemia Genomics
Leveraging exact floating-point Linear Programming solvers for Satisfiability Modulo Theories
LifeArc Centre for Rare Mitochondrial Diseases Award
Light Weight Encryption Techniques
Linking genes to molecules for accelerated antibiotic discovery
Liquid Distribution in Rotating Packed Beds
Liquid biopsy diagnostic and predictive biomarker discovery in hepatocellular carcinoma
Liver Cancer
Low-frequency variant calling from high-quality mtDNA sequencing data
MEC3098 Mechanical Projects
MEC8095
MEC8099 Mechanical Stage 4 Group Project (Baker Hughes)
MHD&WAVES
Machine Learning Method Development for Cancer Biomarker Discovery
Magnetic fields in the Interstellar Medium
Male_Infertility_JorisVeltman
Mapping tumour and immune cell co-evolution in lymphoma of immune privileged sites
Mechanical Engineering Project - MEC3098
Membrane Stability
Metagenomics: Making Microbes Matter
Microbiome Analysis
Mignon AI collaboration
Mignon Training
Mito Cancer Seq LCG
Mitochondrial DNA mutations in upper GI cancers
Mitochondrial DNA, maintenance, disease and propagation
Mitochondrial disease diagnosis without muscle biopsy
Modelling how cell division shapes the evolutionary dynamics of heteroplasmic mtDNA point mutations
Modelling invasive pests
Modelling the Oak Processionary Moth using compartmental ABM
Modelling the spread of wildfires
Molecular Evolution of Starch Metabolism in CAM species
Molecular dynamics of antimicrobial peptides
Molecular modelling of geopolymers
Multi-Modal AI with Transfer Learning for Liver Cancer diagnosis
Multi-Omic Analysis of Myeloid Haematopoiesis and Immunodeficiency
Multi-omic dissection of immunotherapy responses
Multiphase turbulence
Multiscale simulation of high entropy alloys
Myocardial p16 and p21 Senescence in Cardiovascular Ageing and Disease
NAFLD
NGS_INSTINCT
NIHR Innovation Observatory
NIHR Innovation Observatory
NU-025613
NUIT_Academic_IT_All_Members
NUPPA FMS Core Facility
NetZero GeoRDIE
Neural Architecture Search on Reduced Data
Neural Encoder for Composite DNA RLL Codes
Neural Network Exploration of the Trade-off Between Synthesis Time Reduction and Multiple Error Correction in DNA Data Storage
Neural Network Verification
Neural regulation of the developing immune system
NeuroBridge: AI-driven cross-species analysis of memory networks in dementia
Neurobiology of communication
Neuroinflammation
Neuroinformatics research
Neutron Star Vortex Avalanches in 2D and 3D
New force fields for simulations of IDPs
Newcastle Liver Research Group
Newcastle University Frontiers in Engineering Biology
Next generation anion-exchange membranes (AEM) with covalently-bound antiradical functions for enhanced durability
Non-Equilibrium Dynamics of (Non-relativistic) Bosonic Quantum Fluids with Experimental and Astrophysical Modelling Implications: From Atomic to Cosmological Scales
Novel CHP /Trigeneration System
Novel glycoprotease discovery and characterisation
OPSCC transcriptomics analysis
OWL Tools
Obesity Associated Risk Study
Ocean Modelling
Ocean-REFuel - Ocean Renewable Energy Fuels
Ocean-REFuel - Ocean Renewable Energy Fuels
Optimisation of Flexible risers
OrQA
Organic Cathode Materials for Li-ion batteries
Orthogonal Time Frequency Space Modulation (OTFS) Analysis
PET-MR & Gait
PHY8045
PLAS
POLG Islet Single-Cell RNA-seq
PRO-BES
Paediatric Cutaneous Mastocytosis
Penfold Group
Penfoldgroup
Penny Lovat Group sequencing analysis
Personalised multimodal Model for Healthcare Diagnosis and Monitoring
Personalised ultraviolet B (UVB) treatment of psoriasis through biomarker integration with computational modelling of psoriatic plaque resolution
PhD Chemistry
Phosphorescent Probes for Methylglyoxal
Phylogeny reconstruction of bacterial species
Physics-Integrated Energy Systems Model (PI-ES)
Polar surface wave reflector analysis
Policy and Evidence Center - Creative PEC
Political competition and Racial Discrimination
Post-Processing and Improving Markov Chain Monte Carlo
Precision targeting of primary CNS lymphoma and its tumour microenvironment
Predicting ocean dynamics using data-driven methods
Predicting treatment outcomes in neurological disorders
Probabilistic tractography for undergraduate Psychology final year empirical projects
Production of Coevolution Data
Prostate Cancer
Pumped Heat Energy Storage
Quantum Dynamics
Quantum Fluid Dynamics
RECOMP
RNA splicing and gene expression
RSE HPC Team
Radar Interferometry
Rana temporaria ddRADseq
Rational Design of BioElectrochemical Systems
Rational Design of Mitochondrial Uncouplers (MSc Bioinformatics Project)
Reasoning-Aware Mixture-of-Experts for Large Language Models
Record Breaking Flood Analysis
Reducing hallucinations in LVLM
Regulation of gene expression by hormone signalling
Reliable and Fair Machine Learning for Large Language Models and Self-Evolving Agents
Resilience in a fragile environment: Oases in the northern Sahara since 500 BC
Reversal of glucocorticoid resistance in T-cell acute lymphoblastic leukaemia
Risks, ESG and Firm Resilience
Robust Multimodal Deep Learning for Generalizable Sleep Stage Classification
Rocket Benchmarking Project
Rocket_SLS_Phonetics
Role of lateral gene transfer in eukaryote genome evolution
Rotating turbulent quench in a BEC
Rxcelerate Research
Ryan Group Student Projects
S-Cape
SFV Roll Damping
SaFEGen Multi-arm Multi-stage
School of Mathematics, Statistics and Physics
Seizure modeling
Senescence in cardiovascular disease
Shark and ray population genetics
Simulation of quantum tools for use in adiabatic quantum computation
Single cell analysis in rare skin disease
Single cell and spatial characterisation of PCNSL
Single cell profiling of human inner ear
Single-nucleus transcriptomics of donor kidneys during machine perfusion
Smothering in laying hens
Social Media Scanning
Soil Metagenomics
Space-time precipitation
Sparse Probabilistic Richardson Extrapolation Algorithmic Design
Sparse Probabilistic Richardson Extrapolation for Large-Scale Scientific Computing
Spatial Mapping of Macrophage Niches in Follicular Skin Tumours
Spatial Multi-Objective Optimisation of Catchment-Scale Nature-based Solutions Strategies
Spatial Transcriptomic Analysis of Mitochondrial Dysfunction in Primary and Metastatic Colorectal Cancer.
Spatial and temporal bioinformatics analysis of the retina
Species distribution modelling
Stable isotope analysis of benthic-pelagic coupling in NE Atlantic fishes
Statistical ageing epidemiology HPC
Stellar Structure and Evolution model grids with MESA
Stewart Lab MAGs
Stronger Shores: Flood Risk Scenarios
Studying Tropical Cyclones for the Huracan Project
Subsea Structural Integrity with Multiphase Flow-Induced Vibration Assurance
Superconductivity in neutron stars
Sustainable Sludge Valorisation Technology for Closed-Loop Resource Recovery
Sustainable Sludge Valorisation Technology for Closed-Loop Resource Recovery
Synthesis of Atropisomers
Systematic investigation of pyrolysis process and products for sustainable biochar production
Systems Microbiology (laboratory account)
T cell receptor repertoires in immune-mediated lung diseases
T-Max
T-max
Targeting miR-21 to inhibit the inflammatory response following ischaemic kidney injury
Task specific analysis of pairformer block importance in protenix and conditionally routing for better prediction
Testing for mismatch Repair deficiency
The Genomic Investigation of Mitochondrial Disorders
The Grey Field Slug transcriptome
The Intergenerational Impact of Firearm Violence: Evidence from the Beltway Sniper Attacks and Mass Shootings
The Laryngeal Specification of Obstruents in Arabic
The Molecular Genetics of Acute Myeloid Leukaemia
The human RNA exosome
The impact of AI innovations on the UK economy
The impact of terrorism on mental health and well-being in the United Kingdom
TheoreticalChemistry
They've Got Your Eyes
Timelapse landslide deformation tracking
Trade Cost of Brexit Analysis
Traffic Camera Imagery Analysis for Vegetation Phenology Monitoring
TransSHIP II
Trichomonas tenax microbiota interplay in modulating gingival inflammation
Trichomonas-Bacteria_Co_culture_RNAseq
Trust Research Methodology Database (TReMeDa)
Turbulent combustion
Two dimensional materials for Multifunctional Wearable Systems
Ultra-deep radio astronomy imaging
Ultracold Bose gases: far-from-equilibrium dynamics, turbulence, and metrology.
Ultraviolet light as a marine biofoulant control
Uncertainty Quantification
Uncertainty quantification in nuclear engineering
Understanding DNA methylation patterns that determine liver fibrosis progression
Unravelling the drivers of coral reproductive phenology and synchrony
Updating Fuzzy Dark Matter
Upper airway immunity and otitis media with effusion
Urban Sustainability through Integrated Data Analytics
Using machine learning to predict enzyme structure-function relationships
Utilising Inherent Mitochondrial DNA-Induced Oxidative Phosphorylation Defects for Therapeutic Targeting in Colorectal Cancer
Verification of Autonomous Systems with Communication Imperfections
Vipera berus WGS
Vortex avalanche simulations
WAVe: Water Surface Elevation through Monocular Vision
Weed detection in potato
Wellcome Investigator Award: Disentangling relationships between genotype and phenotype in complex genetic disorders, with particular application to liver and kidney disease
Western Melanesian Herpetology
Wilson
YAPCHIP
Zero Wheel Slip Linear Induction Motor (Z_LIM)
analysis of VIV of the curved cylinder with oblique current
cfDNA Sequencing in Rare Cancers
de novo metatranscriptomic assembly of crab and bacterial RNA.
delta-complete linear solver
driving cardiac fibrosis: A novel ex vivo approach to target identification and validation
dyes
eEF1A Target Discovery, Selectivity Profiling, and Drug Repositioning Analysis
fluid-structure interaction of offshore structures
granular flow dynamics
lifetime data analysis
light-weight object tracking
materials modelling halonitrides
mtDNA disease heterogeneity
mtScATAC for high-throughput multi-omic detection of mitochondrial genotypes and chromatin accessibility for macrophage lineage tracing
network meta-analysis of pain
p4@nu
phenological decoupling
scSeq and T-ALL Image Analysis
sequencing study of serotonin in autism

Common phrases used in the description of HPC projects has been extracted and mapped against the community of published projects.

You can browse the directory by frequency analysis of those keywords below.

We also maintain a similar software index of the common tools and technologies which our HPC projects are using.

Descriptive Keyword Frequency
project 146
uses 20
high-performance 14
computing 25
investigate 23
how 18
biological 15
improve 7
efficiency 5
reduce 3
marine 5
47
large-scale 28
computational 41
fluid 16
dynamics 35
cfd 10
simulations 42
including 31
advanced 14
methods 29
capture 5
complex 16
vortex 4
structures 4
flow 12
features 7
observed 5
experimentally 4
generate 12
high-fidelity 4
datasets 67
used 41
design 17
more 12
efficient 12
systems 23
develop 19
predictive 5
models 44
next-generation 5
combine 4
detailed 6
predictions 9
data-driven 5
modelling 39
new 18
insights 4
into 17
hydrodynamic 6
mechanisms 16
outcomes 6
support 22
technologies 8
energy-efficient 3
investigates 18
whether 6
data 123
systematic 4
patterns 12
phylogenetic 4
information 9
identify 28
structural 13
within 22
empirical 5
research 54
compare 8
simulated 4
under 6
model 33
related 11
analyses 24
statistics 6
spanning 3
characterise 9
structure 14
major 3
component 3
candidate 5
evolutionary 3
properties 6
real 3
evaluate 11
control 15
strategies 11
building 3
operations 3
uncertainty 8
energy 10
historical 4
forecast 3
train 4
test 13
deep 22
reinforcement 4
learning 52
involves 20
parallel 25
training 19
neural 17
networks 16
hyperparameter 3
sweeps 3
analysis 96
optimization 4
across 32
emissions 3
peak 3
hpc 46
resources 20
accelerate 4
enable 7
extensive 3
operating 5
conditions 12
high-resolution 6
management 4
statistical 12
digital 3
disease 22
part 5
clinical 11
study 30
evolution 7
over 9
observation 3
assess 7
capacity 3
existing 7
aims 27
progression 5
longitudinal 4
sequences 9
focuses 15
changes 11
key 7
brain 6
regions 7
early 6
biomarkers 4
diagnosis 5
conducting 3
multiple 27
it 14
framework 16
then 7
implemented 3
phd 10
machine 34
dark 3
matter 4
make 6
apply 3
only 4
results 10
observations 4
development 27
application 8
spatial 21
ecological 3
planning 5
policy 3
combines 5
species 5
distribution 3
future 10
climate 10
approaches 8
representation 4
ai 11
techniques 13
analyse 13
imaging 10
their 10
health 5
metagenomic 3
mining 6
prediction 6
libraries 3
current 9
sequence 13
database 5
000 3
several 6
million 3
searches 3
domain 4
filtering 3
clustering 6
primary 7
protein 9
estimate 4
full 5
dataset 13
however 3
gpus 3
stages 4
approach 6
allows 4
while 7
maintaining 3
times 5
each 10
storage 7
requirements 5
files 6
efficiently 4
primarily 8
interactions 14
human 15
tissues 5
leukaemia 3
focus 12
artificial 4
intelligence 4
diseases 6
supporting 6
discovery 4
novel 12
scientific 4
insight 4
well 10
decision 3
patient 10
treatment 10
aiming 3
mitochondrial 11
genomic 9
childhood 3
cancers 5
long 7
short 3
read 7
genome 21
critical 6
gaps 3
ml 3
automated 4
images 12
patients 9
goal 9
image 11
practical 3
ultimately 3
improving 4
simulate 7
action 3
magnetic 6
field 10
develops 8
adaptive 4
intensive 7
unit 4
system 9
integrates 4
laboratory 3
trajectory 4
quantification 7
provide 9
than 4
validation 5
comprehensive 6
water 5
smart 3
usage 3
integrate 7
generative 6
behaviour 9
relationship 3
retinal 3
integrating 6
multi-modal 3
large 69
language 5
developing 10
segmentation 4
frameworks 4
extract 4
associated 9
involve 4
evaluating 4
scale 11
layer 3
extraction 3
feature 5
assessment 4
bioinformatics 19
genetic 11
skin 5
transcriptomics 8
proteomic 3
bulk 9
single 23
cell 28
levels 4
python 22
r 14
high 35
performance 10
single-cell 11
designed 4
10x 4
genomics 8
pipeline 12
comet 12
following 4
raw 7
illumina 4
sample 4
fastq 4
quality 13
generation 7
samples 15
outputs 10
satellite 6
imagery 4
public 4
create 9
products 5
most 4
challenges 4
researchers 5
university 5
newcastle 7
include 19
pipelines 14
workflows 11
present 3
investigating 3
stress 5
transcriptomic 11
sequencing 39
molecular 25
rna 22
rna-seq 12
gene 13
expression 9
cellular 9
heterogeneity 3
fibrotic 3
processes 10
established 3
process 11
required 12
resistance 3
facility 18
perform 8
bioinformatic 7
order 5
predict 5
better 7
understand 8
dna 14
mutations 6
both 18
mtdna 4
time 9
specifically 4
mouse 3
mutation 5
reflect 3
stem 3
populations 6
influence 9
during 7
plausible 3
tissue 11
types 11
offer 3
landscape 3
endothelial 3
cells 12
its 4
high-throughput 4
signatures 4
biology 6
immune 11
alignment 11
profiling 4
resulting 4
regulation 3
ont 3
rare 3
variants 5
cause 3
often 4
focusing 4
factors 5
nuclei 5
uncover 3
regulatory 3
cell–cell 3
communication 4
pathways 7
formation 4
genes 3
when 7
define 4
network 6
map 12
scalable 3
modeling 4
dynamic 5
autoencoders 3
robust 4
representations 3
accuracy 10
presence 3
significant 4
end-to-end 3
optimisation 10
learn 3
electrical 5
could 6
applications 12
continuously 4
without 3
understanding 16
build 8
flexible 3
de 3
theory 10
open 3
question 3
errors 3
longer 3
allow 3
published 3
access 10
complete 4
driving 5
transport 6
impact 8
experimental 13
measurements 3
spectra 5
phase 3
example 4
through 13
hydrogen 5
theoretical 3
chemistry 7
calculations 20
dft 8
generating 4
analytical 5
computationally 7
connectivity 4
supports 4
gridded 3
against 7
temporal 3
trends 3
events 7
improved 3
hydrological 4
utilise 3
long-read 4
custom 5
cancer 10
quantify 3
drivers 4
force 4
mass 4
multimodal 4
modern 5
reconstruction 4
generated 11
fibroblasts 3
analysed 4
differential 9
programmes 6
senescence 3
signalling 4
matrix 4
remodelling 3
functional 11
ontology 3
databases 5
transcriptional 4
transient 6
potential 9
reproducible 3
processing 53
downstream 6
assembly 3
visium 4
xenium 3
cell-cell 3
interaction 3
detection 7
quantum 9
separation 3
molecules 5
many 13
simulation 22
density 9
optimise 3
surfaces 3
method 7
activity 8
parameters 7
forms 3
workloads 3
cover 4
mechanical 3
ansys 6
fea 3
funded 4
algorithms 12
code 20
composition 3
surface 5
performing 5
exploratory 4
investigations 4
small 10
compounds 3
targets 6
quantitative 5
specificity 4
metadata 3
evidence 3
classify 3
records 4
direct 4
binding 6
profiles 4
proteins 5
chemical 4
studies 15
evaluates 3
heat 4
benchmarks 3
architectures 9
alongside 3
environmental 3
evaluation 6
convolutional 3
gpu 9
extended 4
detect 9
were 3
past 4
earth 4
computer 7
science 7
big 5
number 10
robustness 3
problem 3
mainly 4
about 4
accurate 4
measurement 3
metrics 4
classification 6
programming 3
computations 3
developed 8
compute 8
limits 3
seeks 5
find 5
around 5
material 6
main 5
first 3
integrated 4
comparing 4
states 6
stromal 3
environments 4
findings 4
therapeutic 6
land 3
change 3
spatially 4
distributed 3
fully 4
flows 3
scenarios 3
infrastructure 5
numerical 15
convection 3
core 5
being 4
variation 5
effects 4
internal 3
boltzmann 3
text 7
chip-seq 4
lines 4
analysing 7
navier-stokes 4
conducted 5
open-source 3
risk 4
metabolic 6
drug 7
state-of-the-art 3
requires 7
terms 5
similar 4
thus 4
microbiome 3
participants 4
addition 3
variant 5
relevant 8
faculty 5
experiments 10
benchmark 3
range 5
projects 6
strategy 4
where 8
depth 3
wave 3
mode 4
elevation 3
two 8
along 4
limited 5
performed 3
physical 5
solver 7
body 3
dementia 3
various 8
scripts 8
high-quality 3
association 3
accessible 3
likely 3
solving 3
solvers 3
library 3
instances 3
size 3
runs 5
runtime 3
parameter 5
mcmc 4
superfluid 4
distinct 4
integration 4
equations 7
equation 4
particular 7
utilising 3
targeting 3
conduct 5
level 4
multi-omic 4
making 3
immunity 3
normal 4
developmental 3
spread 4
tumour 5
hybrid 3
agent-based 3
mapping 6
inference 5
contributes 3
microenvironmental 3
inform 3
architecture 5
msc 4
fields 4
context 3
thermal 3
turbulence 3
gross-pitaevskii 3
additional 5
role 5
group 6
highly 25
validate 3
controls 3
neuronal 3
student 5
enabling 5
technology 4
coding 3
three 4
capability 3
accelerated 3
algorithm 3
testing 5
materials 7
students 6
capable 3
diagnostic 3
establish 3
generalisation 3
probabilistic 3
determine 4
reliable 3
fine-tuning 3
tasks 7
flood 4
global 4
impacts 3
tens 4
years 3
cleaning 3
memory 32
workflow 5
measures 3
repair 3
function 3
amplicon 3
look 3
receptor 3
space 3
calling 6
fundamental 5
nodes 7
engineering 4
team 7
bayesian 6
reaction 3
phenomena 4
transfer 4
state 4
solution 3
identifying 5
solutions 3
individual 5
outside 3
before 3
out 3
annotation 3
speed 4
combining 4
computation 6
stars 3
explore 4
vegetation 3
natural 4
underlying 3
programs 3
drive 3
few 3
electronic 4
members 6
central 3
contribute 5
generates 3
disordered 3
type 3
alternative 3
combustion 4
instabilities 3
flames 3
t 3
genetics 3
multiphase 3
was 4
created 4
hold 3
temporary 4
acceptance-test 3
teams 3
assisted 3
introduction 3
sign-off 3
100 3
cores 11
enables 3
typically 4
fuel 3
particle 3
parallelised 25
fortran 12
matlab 16
batch 4
script 4
multi-core 3
ram 7
gaussian 3
us 4
response 3
ab 3
initio 3
serial 18
whole 4
exome 4
rocket 5
3d 4
take 3
days 3
queue 3
c 12
nucleotide 3
rnaseq 8
low 3
sets 4
alignments 4
application-based 10
mpi 3
post-processing 4
visualisation 3
liver 3
includes 3
battery 3
stability 4
employed 3
node 4
pressure 3
population 3
finite 3
element 3
default 3
fall-back 3
container 3
school-based 3
officers 3