Project Contacts

For further information about this project, please contact:

• Dr Daniel Williamson (daniel.williamson@newcastle.ac.uk)
• Dr Simaran Johal (sim.johal@newcastle.ac.uk)

Project Description

Project for alignment and processing of sequencing results including RNA-seq analysis, WGS, WES, Variant calling and boosting algorithms for feature selection.

Software or Compute Methods

BWA and other sequence aligners and associated processing and qc tools including RNA-STAR, HISAT2, GATK, TOPHAT2, CUFFDIFF, Picard, cell ranger, etc.