Our Research Projects

T-max

This is a project which is currently making use of HPC facilities at Newcastle University. It is active.

Project Contacts

For further information about this project, please contact:


Project Description

Project for members of the Hambleton laboratory where we investigate Inborn Errors of Immunity with a specific focus on T-cell biology. We utilise the HPC facility for analysis of multiomics data which historically has included Exome, Genome, RNA (bulk & single cell) sequence with plans for additional datatypes on the upgraded HPC facility.


Software or Compute Methods

Standard software for exome/genome/rna analysis (e.g. Fastqc, BWA, STAR, Samtools, Bcftools, VEP, R/R-packages, Perl & Python scripts).