This is a historic project which has previously made use of HPC facilities at Newcastle University.
For further information about this project, please contact:
Application based processing of large datasets. Serial jobs needing high memory (normally between 10-80Gb but sometimes up to 200Gb). A mixture of multiple small Jobs, jobs that run for several days and sometimes jobs that run for a week or more.
R Perl Python Java GO Fastuniq FastQC BWA STAR Bowtie2 Samtools/Bcftools Cramtools Bedtools VCFtools BamUtils Picard GATK Tophat Varscan2 HT-seq seqtk Cufflinks PLINK VEP Annovar Circos github