Our Research Projects

Exploratory computational investigations of single cell/nuclei of ichthyosis samples

This is a project which is currently making use of HPC facilities at Newcastle University. It is active.

Project Contacts

For further information about this project, please contact:


Project Description

Project for performing pipeline and exploratory computational investigations of single cell/nuclei and spatial technologies datasets of ichthyosis samples funded by MRF grant.


Software or Compute Methods

Git, virtual environments and containers (primarily for python and R work), bash scripting, cpu and gpu compute, single cell/nuclei and spatial technologies outputs, recognised public package workflows (e.g. scanpy, bin2cell, squidpy, miloR/milopy, scvi-tools) and custom packages and scripts.