We found the following 35 published projects which all share the keyword packages amongst their description of software or software methods used.

Title
A Statistical Framework for efficient Evidence Generation in diagnostics (SaFEGen)
ALL_Mito
Analysis of Digital Mobility Outcomes from the EJS-ACT PD and mobilise-D Studies
Augmenting galaxy catalogues in cosmological simulations using machine learning
Climate Resilient Heat Electrification for Net-Zero Emission Whole Energy Systems – RENEW
Computational Analysis of Transcriptomic Sequencing Data in Fibrosis Research
Cyprid cement gland differential transcriptome
DARWIN
Dicentric chromosomes in Cancer
EXTREME-FUTURES
Epigenetics of MSK
Exploratory computational investigations of single cell/nuclei of ichthyosis samples
Exploring the role of repetitive genomic regions in childhood cancer and leukaemia, using long-read and hybrid sequencing technologies
Genetic studies of liver disease
IHEC
KnockoffGWAS Framework
Large-Scale Energy-System Optimization Benchmarking
Leveraging exact floating-point Linear Programming solvers for Satisfiability Modulo Theories
Myocardial p16 and p21 Senescence in Cardiovascular Ageing and Disease
Newcastle Liver Research Group
Non-Equilibrium Dynamics of (Non-relativistic) Bosonic Quantum Fluids with Experimental and Astrophysical Modelling Implications: From Atomic to Cosmological Scales
Predicting ocean dynamics using data-driven methods
RSE HPC Team
Spatial Mapping of Macrophage Niches in Follicular Skin Tumours
Spatial Transcriptomic Analysis of Mitochondrial Dysfunction in Primary and Metastatic Colorectal Cancer.
Statistical ageing epidemiology HPC
Systematic investigation of pyrolysis process and products for sustainable biochar production
T-Max
The Molecular Genetics of Acute Myeloid Leukaemia
Uncertainty quantification in nuclear engineering
Updating Fuzzy Dark Matter
Vortex avalanche simulations
Wellcome Investigator Award: Disentangling relationships between genotype and phenotype in complex genetic disorders, with particular application to liver and kidney disease
eEF1A Target Discovery, Selectivity Profiling, and Drug Repositioning Analysis
light-weight object tracking