Our Research Projects


Our Research Projects

The research of our HPC user community at Newcastle University spans many disciplines and subject areas. A list of current projects which have used the HPC facilities are shown below.

The wordcloud graphic above is a dynamic representation of the keywords used in the descriptions of our published HPC research projects.

We also maintain a software index of the common tools and technologies which our HPC projects are using.

Title
Project ID 2554
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Project ID 2675
Project ID 2676
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Project ID 2678
Project ID 2679
Project ID 2681
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Project ID 2684
Project ID 2685
Project ID 2686
Quantum computing feasibility
Improving the Quality of Synthetic Data for Clinical Trials
Multimorbidity and the risk of subsequent dementia
Newcastle University and Northumbrian Water KTP
3-D NUMERICAL SIMULATIONS OF SUBSEA JUMPER TRANSPORTING INTERMITTENT SLUG FLOWS
3d nucleus segmentation
A CFD Approach to Emissions Control
A Statistical Framework for efficient Evidence Generation in diagnostics (SaFEGen)
A combined experimental and computational investigation of greenhouse gas adsorption on biochar
A systematic comparison of integrated genomic platforms and bioinformatics pipelines for next generation sequencing in patients with rare neuromuscular disease
ADMISSION Statistical Genetics
AGM
AI BADBIR
AI Driven Discovery for Designer Biocatalytic Enzymes for Specifically Cold-Active Alkaline α-Amylases in Sustainable Detergent Applications.
AMR Flows
Abstraction of Stochastic Systems
Acoustofluidic LbL machine
Actionable deep learning under uncertainty for carbon-centric building operations
Active vision and pattern discrimination in bumblebees
Adaptive Treatment Planning for ICU Patients using Multimodal Data Fusion with Uncertainty Quantification
Advancing Molecular Modeling with Machine-Learned Interatomic Potentials (MLIPs)
Agent-based models of food-hoarding birds
Amide Hole Transporters for optoelectronic applications
An investigation on the changing size-frequency distributions and life history traits of Acropora digitifera at a shallow reef in Palau using reef orthomosaics
Analysing single cell RNA sequencing data
Analysis of High Frequency Investor Trading Data
Analysis of scRNASeq data for p53 and NF-kB gene signatures
Analysis of snRNAseq data of muscle samples from patients with muscular diseases
Antarctic Global Positionning System (GPS) Data Processing
Antimicrobial Resistance
Application Cloud Resource Usage Prediction
Applications of Deep Learning and Large Language Models in Multi-Modal Ophthalmic Imaging for Brain Health
Applied Biomimetics Marine Hydrodynamics
Artificial Intelligence for knowledge extraction and decision making support in Rheumathology
Artificial Intelligence for the analysis of Retinal imaging data
Assessing and predicting natural and environmental impacts on cultural heritage landscapes: a case study on Hadrian's Wall
Assessing the Impact of Scour on the Capacity of Foundations for Floating Offshore Wind Turbines
Autonomous Racing
BIOlogical Factors that Limit sustAined Remission in rhEumatoid arthritis (the BIO-FLARE study)
BREAKTHROUGH MEASURES FOR US AND EUROPEAN PATENTS
BSU Pilot
BSU beta scRNA-seq
Battery Materials Analysis
Bayesian Time Series Modelling
BeeGuards
Big Data for Synthetic Biology
BioDynaMo retinal development
Biodiversity response to habitat fragmentation
Bioinformatics Support Unit
Bioinformatics_Stach
Biostatistics Research Group
Brain Health Assessment via Multi-Modal Retinal Imaging with Deep Learning and Large Language Models
Brain aging neuroimaging analysis
CFD analysis for advanced ship propulsion systems with hydrogen
CFD for reacting and high-speed flows
CIEL
CME8128 MEng Research Project
CRUK_omics
CTN NHP
CableDyn
Cell Senscence Assay Counting
CellModeller cloud
Changes in cognitive and motor function in ageing and neurodegenerative conditions
Characterisation of endothelial dsRNA-ome in the context of A-to-I RNA editing
Characterising Human Milk Oligosaccharides in Breast Milk and their Degradation by Bifidobacterium species
Chemical Looping Ammonia Synthesis Material Screening
Chemistry-Orca
Choice Modelling in transportation using the XGBoost
City Pulse GNN
Climate change effects on the spread of wildfires
Clonal Haematopoeisis in elderly, sarcoidosis and ECD
Cluster Sputtering Simulation
Coastal protection under horizontal disk structures
Comet Acceptance Testing Group 1
Comet Acceptance Testing Group 2
Comet Acceptance Testing Group 3
Comet HPC Training Workshops
Computational Chemistry of Main Group Compounds
Computational Structural Biology
Computational cardiology research and teaching activity
Computational fluid dynamics (CFD) study of Severe Slugging in a S-Shape Steel Lazy Wave Riser (SLWR)
Computational modelling of neural layer formation
Computational simulation for fundamental understanding of turbulent reacting flows and its modelling
Computer-aided drug design
Computing Officers - FMS
Computing Officers - HASS
Computing Officers - SAgE
Convection and dynamo action in the solar interior
Cooling Power Electronics
Coral Adapt
Correlating Neural Activity RSE
Cortical folding analysis and simulation
Creativity Engine
Cross tissue expression
Cross-trait meta-analysis of primary biliary cholangitis (PBC) and other immune-mediated inflammatory diseases (IMIDs)
Crystal Structure Prediction
Crystallographically-Architected Mechanical Metamaterials (CrystArMM)
Cyprid cement gland differential transcriptome
DARWIN
DFT studies of superbase catalysts for methyl methacrylate production in Collaboration with Mitsubishi Chemical UK
DNAcomputing
Dark sector from cosmic shear
Daryl Shanley's Lab
Data-Driven Synthesis of CPS
Data_Driven_Abstraction
Deciphering the local effects of ToIDC administration on the inflamed synovial microenvironment of patients in the AutoDeCra 1 clinical trial
Deep Learning for Drug Repurpsing
Deep learning model development and training
DeepLabCut Deep Learning Model for Dog pose Estimation
Delineating the cutaneous tumour microenvironment in Birt-hogg-Dubé Syndrome
Design Unit - Mechanical Stress Analysis Project A.
Design and FEA simulation of a custom CPAP mask device
Design and Manufacture of Novel 3D printed electrodes
Development and application of statistical methodology for the detection and characterisation of genetic factors in complex disease
Development of Intact Stability Criteria for Indonesian Traditional Small Fishing Vessels
Development of an Energy Efficiency Decision Support System for Ship with Integrated Energy Saving Technologies
DiMEN Spatial Transcriptomics
Diamond
Dicentric chromosomes in Cancer
Dormouse Modelling NE
Dynamic Charging for Electric Vehicles
Dynamics of planetary cores
Dynamos in planets
ELU2024
EPSRC e-mudrive wave generater
Elucidating splicing factor function and retinal splicing programmes: developing new therapeutic strategies for splicing factor retinitis pigmentosa
Energy Materials Laboratory
Epigenetics of MSK
Epilepsy detection based on unsupervised learning
Excited State Dynamics
Excited State Structure of BODIPY Dyes
Experimental data constrained computation of Elementary Flux Mode
Exploring the role of repetitive genomic regions in childhood cancer and leukaemia, using long-read and hybrid sequencing technologies
FLF Next generation atomistic modelling for medicinal chemistry and biology
FSHD omics data
Flue Gas Cooling and Water Purification
Fluid dynamics inside planetary interiors
Food Recognition Model for Self-Recall Dietary Assessment
Formal Verification and Synthesis of Stochastic Systems
Freshwater AOH and STAR
GCRF: DAMS 2.0: Design and Assessment of resilient and sustainable interventions in water-energy-food-environment Mega Systems
GLOF process chain modelling in the Bhutan Himalaya
GNSS and InSAR geodesy
Generative AI evaluation
Generative AI for dynamic health monitoring system
Generic Atmospheric Correction Online Service for InSAR (GACOS)
Genetic studies of liver disease
Genetic studies using UK Biobank
Genetic variation in eye disease
Genetics of Beta Cell function
Genome Analysis of Streptomyces
Genomic Characterisation of B cell non-Hodgkin Lymphoma
Geostrophic adjustment within a rotating, stratified fluid
Geothermal Exploration Modelling
Gut Microbiome and Metabolic Disorders
HPC usage
HTC modelling and optimisation
HTC reactor
HeiMOVE
Herpetology genomics
Hifidelity Simulation of VAWT
High Entropy Alloys Design
High Power Computing for training Deep Reinforcement Learning Models for Optimisation Problems
High throughput transcriptomics of Cyanobacteria
High-fidelity simulation and modelling of turbulent flows
High-throughput analysis of microscopy images from drug screens
Horned-OWL bench
IBD-RESPONSE
ICED (Intensified Cooling for Electronic Devices)
IHEC
IMAGINE
Identification and exploitation of biosynthetic pathways from Ascocoryne sarcoides
Identification of sarcopenia from clusters of multiple long-term conditions in UK Biobank
Image Generation with Deep Generative Models for Medical Imaging
Imaging Geodesy - InSAR
Imago
Impact of the use of weather information on the accuracy of power production models for offshore wind turbines
Improving radar rainfall estimates for using Monte Carlo ensemble simulation
Intelligent Internet of Things
Interactions between internal waves and offshore wind infrastructure
Internal Gravity Waves in Massive Stars
Investigating Mitochondrial Translation Defects
Investigating polysaccharide breakdown capacity of the human gut microbiota
Investigating the role of bacterial polysaccharides in the maintenance of healthy gut bacteria
Ion transport and interfaces in solid electrolytes
Kalanchoe blossfeldiana
KnockoffGWAS Framework
LITMUS_ANALYTICS
Leukaemia Genomics
Light Weight Encryption Techniques
Linking genes to molecules for accelerated antibiotic discovery
Liquid Distribution in Rotating Packed Beds
Liquid biopsy diagnostic and predictive biomarker discovery in hepatocellular carcinoma
Liver Cancer
Low-frequency variant calling from high-quality mtDNA sequencing data
MEC3098 Mechanical Projects
MEC8095
MEC8099 Mechanical Stage 4 Group Project (Baker Hughes)
MHD&WAVES
Magnetic fields in the Interstellar Medium
Male_Infertility_JorisVeltman
Mechanical Engineering Project - MEC3098
Membrane Stability
Microbiome Analysis
Mignon AI collaboration
Mignon Training
Mito Cancer Seq LCG
Mitochondrial DNA mutations in upper GI cancers
Mitochondrial DNA, maintenance, disease and propagation
Mitochondrial disease diagnosis without muscle biopsy
Modelling invasive pests
Modelling the Oak Processionary Moth using compartmental ABM
Molecular Evolution of Starch Metabolism in CAM species
Molecular dynamics of antimicrobial peptides
Molecular modelling of geopolymers
Multi-Modal AI with Transfer Learning for Liver Cancer diagnosis
Multiphase turbulence
Multiscale simulation of high entropy alloys
NAFLD
NGS_INSTINCT
NIHR Innovation Observatory
NIHR Innovation Observatory
NUIT_Academic_IT_All_Members
NUPPA FMS Core Facility
NetZero GeoRDIE
Neural Network Verification
Neurobiology of communication
Neuroinflammation
Neuroinformatics research
Neutron Star Vortex Avalanches in 2D and 3D
New force fields for simulations of IDPs
Newcastle University Frontiers in Engineering Biology
Next generation anion-exchange membranes (AEM) with covalently-bound antiradical functions for enhanced durability
Novel CHP /Trigeneration System
Novel glycoprotease discovery and characterisation
OPSCC transcriptomics analysis
OWL Tools
Ocean Modelling
Ocean-REFuel - Ocean Renewable Energy Fuels
Ocean-REFuel - Ocean Renewable Energy Fuels
Optimisation of Flexible risers
Organic Cathode Materials for Li-ion batteries
Orthogonal Time Frequency Space Modulation (OTFS) Analysis
PET-MR & Gait
PHY8045
PLAS
POLG Islet Single-Cell RNA-seq
PRO-BES
Penfold Group
Penny Lovat Group sequencing analysis
Personalised ultraviolet B (UVB) treatment of psoriasis through biomarker integration with computational modelling of psoriatic plaque resolution
PhD Chemistry
Phosphorescent Probes for Methylglyoxal
Phylogeny reconstruction of bacterial species
Physics-Integrated Energy Systems Model (PI-ES)
Policy and Evidence Center - Creative PEC
Political competition and Racial Discrimination
Post-Processing and Improving Markov Chain Monte Carlo
Precision targeting of primary CNS lymphoma and its tumour microenvironment
Predicting ocean dynamics using data-driven methods
Predicting treatment outcomes in neurological disorders
Production of Coevolution Data
Pumped Heat Energy Storage
Quantum Dynamics
Quantum Fluid Dynamics
RECOMP
RNA splicing and gene expression
Radar Interferometry
Rana temporaria ddRADseq
Rational Design of BioElectrochemical Systems
Reducing hallucinations in LVLM
Resilience in a fragile environment: Oases in the northern Sahara since 500 BC
Reversal of glucocorticoid resistance in T-cell acute lymphoblastic leukaemia
Robust Multimodal Deep Learning for Generalizable Sleep Stage Classification
Rocket Benchmarking Project
Rocket_SLS_Phonetics
Role of lateral gene transfer in eukaryote genome evolution
Rotating turbulent quench in a BEC
Rxcelerate Research
S-Cape
SFV Roll Damping
School of Mathematics, Statistics and Physics
Seizure modeling
Senescence in cardiovascular disease
Shark and ray population genetics
Simulation of quantum tools for use in adiabatic quantum computation
Single cell analysis in rare skin disease
Smothering in laying hens
Social Media Scanning
Soil Metagenomics
Space-time precipitation
Sparse Probabilistic Richardson Extrapolation Algorithmic Design
Spatial Simulations
Spatial and temporal bioinformatics analysis of the retina
Species distribution modelling
Stable isotope analysis of benthic-pelagic coupling in NE Atlantic fishes
Statistical ageing epidemiology HPC
Stewart Lab MAGs
Studying Tropical Cyclones for the Huracan Project
Subsea Structural Integrity with Multiphase Flow-Induced Vibration Assurance
Superconductivity in neutron stars
Sustainable Sludge Valorisation Technology for Closed-Loop Resource Recovery
Sustainable Sludge Valorisation Technology for Closed-Loop Resource Recovery
Synthesis of Atropisomers
Systems Microbiology (laboratory account)
T cell receptor repertoires in immune-mediated lung diseases
T-Max
T-max
Targeting miR-21 to inhibit the inflammatory response following ischaemic kidney injury
The Genomic Investigation of Mitochondrial Disorders
The Grey Field Slug transcriptome
The Intergenerational Impact of Firearm Violence: Evidence from the Beltway Sniper Attacks and Mass Shootings
The Laryngeal Specification of Obstruents in Arabic
The Molecular Genetics of Acute Myeloid Leukaemia
The human RNA exosome
The impact of AI innovations on the UK economy
The impact of terrorism on mental health and well-being in the United Kingdom
TheoreticalChemistry
They've Got Your Eyes
Trade Cost of Brexit Analysis
Traffic Camera Imagery Analysis for Vegetation Phenology Monitoring
TransSHIP II
Trichomonas tenax microbiota interplay in modulating gingival inflammation
Trichomonas-Bacteria_Co_culture_RNAseq
Turbulent combustion
Two dimensional materials for Multifunctional Wearable Systems
Ultra-deep radio astronomy imaging
Ultracold Bose gases: far-from-equilibrium dynamics, turbulence, and metrology.
Ultraviolet light as a marine biofoulant control
Uncertainty Quantification
Uncertainty quantification in nuclear engineering
Understanding DNA methylation patterns that determine liver fibrosis progression
Unravelling the drivers of coral reproductive phenology and synchrony
Urban Sustainability through Integrated Data Analytics
Using machine learning to predict enzyme structure-function relationships
Verification of Autonomous Systems with Communication Imperfections
Vipera berus WGS
Vortex avalanche simulations
Weed detection in potato
Wellcome Investigator Award: Disentangling relationships between genotype and phenotype in complex genetic disorders, with particular application to liver and kidney disease
Western Melanesian Herpetology
Wilson
YAPCHIP
Zero Wheel Slip Linear Induction Motor (Z_LIM)
analysis of VIV of the curved cylinder with oblique current
delta-complete linear solver
driving cardiac fibrosis: A novel ex vivo approach to target identification and validation
dyes
fluid-structure interaction of offshore structures
granular flow dynamics
lifetime data analysis
light-weight object tracking
materials modelling halonitrides
mtDNA disease heterogeneity
mtScATAC for high-throughput multi-omic detection of mitochondrial genotypes and chromatin accessibility for macrophage lineage tracing
network meta-analysis of pain
p4@nu
phenological decoupling
scSeq and T-ALL Image Analysis
sequencing study of serotonin in autism

Common phrases used in the description of HPC projects has been extracted and mapped against the community of published projects.

You can browse the directory by frequency analysis of those keywords below.

We also maintain a similar software index of the common tools and technologies which our HPC projects are using.

Descriptive Keyword Frequency
project 61
uses 8
high-performance 8
computing 15
investigate 9
how 6
biological 8
improve 3
efficiency 3
reduce 3
19
large-scale 12
computational 28
fluid 15
dynamics 26
cfd 9
simulations 28
including 12
advanced 10
methods 12
complex 7
vortex 3
flow 6
features 5
generate 7
high-fidelity 3
datasets 46
used 18
design 11
more 4
efficient 5
systems 14
develop 5
predictive 3
models 19
next-generation 4
predictions 4
data-driven 3
modelling 26
new 12
insights 3
into 8
hydrodynamic 3
mechanisms 5
support 9
technologies 4
control 11
under 4
uncertainty 4
energy 7
historical 3
data 81
test 7
deep 15
reinforcement 4
learning 39
research 23
involves 7
parallel 20
training 12
neural 9
networks 7
analysis 62
across 11
peak 3
hpc 21
resources 4
model 16
enable 3
extensive 3
operating 4
conditions 7
focuses 6
development 16
ai 4
techniques 5
analyse 4
imaging 4
related 5
their 5
health 4
mining 6
structure 7
prediction 3
sequences 3
libraries 3
current 6
sequence 10
database 4
several 3
searches 4
analyses 12
clustering 3
primary 3
protein 5
dataset 9
gpus 3
stages 3
while 3
times 4
each 4
storage 4
requirements 5
files 5
within 3
focus 7
diseases 3
novel 6
scientific 3
well 5
patient 5
treatment 5
develops 3
adaptive 3
planning 3
framework 7
intensive 3
unit 3
patients 3
system 5
results 8
clinical 4
patterns 5
provide 6
aims 8
retinal 3
integrating 4
images 7
large 59
developing 4
segmentation 3
extract 3
structural 6
associated 3
scale 6
feature 3
goal 4
10x 3
genomics 5
pipeline 6
comet 8
raw 5
illumina 4
sample 4
fastq 4
quality 9
generation 3
samples 7
outputs 4
make 3
satellite 3
create 4
products 3
most 3
researchers 3
investigates 5
rna 11
cells 5
high-throughput 4
sequencing 22
characterise 3
identify 5
influence 6
biology 4
facility 13
bioinformatics 14
pipelines 8
read 5
alignment 8
transcriptomic 4
modeling 3
robust 3
accuracy 4
long-read 3
custom 3
cancer 4
workloads 4
mechanical 3
ansys 5
fea 3
genomic 7
seeks 4
changes 4
study 10
around 4
long 5
material 5
studies 8
functional 5
main 3
perform 3
numerical 9
convection 3
core 5
magnetic 4
field 7
being 3
generated 5
include 10
variation 4
effects 4
navier-stokes 3
both 8
simulation 17
optimisation 4
build 3
it 7
scripts 8
high-quality 3
association 3
genetic 4
likely 3
disease 9
quantum 5
superfluid 3
two 5
method 5
integration 3
equations 5
particular 5
generating 3
spread 3
species 3
agent-based 3
machine 24
computer 4
molecular 9
interactions 4
required 5
understanding 8
molecules 3
human 4
force 3
fields 3
approaches 3
drug 4
materials 6
calculations 16
allow 3
fundamental 3
factors 3
nodes 6
classification 3
high 30
algorithms 7
architectures 3
performance 4
engineering 4
team 6
detect 5
tissue 3
bayesian 5
statistical 6
could 4
applications 5
state 3
gpu 8
compute 3
speed 4
many 8
combining 3
tasks 4
when 3
number 8
modern 3
experiments 3
few 3
primarily 4
members 6
various 6
combustion 4
behaviour 4
instabilities 3
relevant 5
flames 3
hydrogen 4
contribute 4
science 3
genetics 3
workflows 3
developed 4
was 4
created 4
hold 3
temporary 4
acceptance-test 3
teams 3
assisted 3
introduction 3
sign-off 3
cores 11
students 3
solver 3
enables 3
typically 4
fuel 3
image 9
single 12
particle 3
highly 24
parallelised 26
fortran 12
code 17
matlab 16
processing 44
batch 4
script 4
r 13
text 4
ram 7
testing 3
gaussian 3
memory 30
dft 6
electrical 3
properties 3
ab 3
initio 3
serial 18
exome 3
through 5
rocket 5
transient 3
multiple 13
big 4
python 19
computation 6
matrix 3
3d 4
single-cell 4
days 3
queue 3
application 7
map 4
c 12
time 5
nucleotide 3
genome 15
mapping 3
climate 4
dna 7
rnaseq 8
low 3
types 4
cell 9
where 5
expression 3
then 3
gene 5
during 3
sets 4
rna-seq 6
access 6
alignments 4
calling 5
process 5
simulate 4
differential 5
parameter 3
application-based 10
variant 3
electronic 3
transport 3
bulk 5
metabolic 3
requires 3
statistics 3
mpi 3
post-processing 4
visualisation 3
spatial 7
terms 3
transfer 3
student 4
chemistry 4
employed 3
explore 3
range 3
node 4
small 8
processes 4
network 3
mitochondrial 4
group 3
understand 3
population 3
phylogenetic 3
experimental 3
limited 3
finite 3
element 3
default 3
fall-back 3
container 3
school-based 3
officers 3
faculty 3
analysing 3